|
nb
|
Candidate pop- CpGs
|
Genomic position (GRCh:37)
|
Locus
|
Gene region
|
Type of region
|
|Mav_diff|
|
q-value
|
|---|
|
1
|
cg18136963
|
chr6:139013146
|
FLJ49
|
not provided
|
N_Shore
|
2.950
|
0.0355
|
|
2
|
cg26367031
|
chr3:178984747
|
KCNMB3
|
5’UTR; 1st exon
|
not provided
|
2.775
|
0.0215
|
|
3
|
cg03140118
|
chr1:37939320
|
ZC3H12A
|
TSS1500
|
N_Shore
|
2.411
|
0.001
|
|
4
|
cg23669876
|
chr1: 36489276
|
AGO3
|
Body (LTR)
|
not provided
|
2.355
|
0.0039
|
|
5
|
cg00862290
|
chr3:178984973
|
KCNMB3
|
TSS200
|
S_Shore
|
2.247
|
0.008
|
|
6
|
cg08979191
|
chr5:132113734
|
SEPT8
|
TSS200
|
S_Shore
|
1.875
|
0.0185
|
|
7
|
cg24037715
|
chr14: 35203968
|
–
|
not provided
|
sea
|
1.691
|
0.0003
|
|
8
|
cg07207043
|
chr6:7051497
|
RREB1
|
not provided
|
CpG Island
|
1.534
|
0.0345
|
|
9
|
cg04036182
|
chr15:45458818
|
SHF
|
not provided
|
CpG Island
|
1.451
|
0.0201
|
|
10
|
cg00031303
|
chr3: 195681400
|
SDHAP1
|
not provided
|
CpG Island
|
1.359
|
0.005
|
|
11
|
cg07904028
|
chr4:6328508
|
PPP2R2C
|
body
|
not provided
|
1.257
|
0.0145
|
|
12
|
cg09972454
|
chr16: 15083088
|
PDXDC1
|
body
|
N_Shore
|
1.232
|
0.0029
|
|
13
|
cg24861686
|
chr8:11418058
|
BLK
|
body
|
N_Shelf
|
1.193
|
0.000
|
|
14
|
cg03585734
|
chr1: 15598865
|
FHAD1
|
body
|
not provided
|
1.123
|
0.0144
|
- CpGs selected for pyrosequencing validation are bolded. Shores and shelves are defined in Illumina as regions 0–2 kb and 2–4 kb, respectively, from a CpG island. N Upstream, S Downstream, TSS Transcription site start, LTR Long terminal region
