Table 1 Quality analyses of small RNA-seq data
From: Integrated analysis of miRNA and mRNA expression profiles in testes of Duroc and Meishan boars
Sample | Total reads | high_quality | Smaller_than_18nt | PolyA | Clean reads |
|---|---|---|---|---|---|
D20 | 13,335,120 | 13,268,836 (100%) | 79,018 (0.60%) | 15 | 13,133,806 (98.98%) |
D75 | 13,051,493 | 12,987,508 (100%) | 41,877 (0.32%) | 21 | 12,892,394 (99.27%) |
D270 | 13,352,724 | 13,289,346 (100%) | 70,860 (0.53%) | 16 | 13,167,240 (99.08%) |
M20 | 13,606,755 | 13,537,863 (100%) | 42,915 (0.32%) | 22 | 13,441,877 (99.29%) |
M75 | 12,695,970 | 12,642,443 (100%) | 23,239 (0.18%) | 28 | 12,561,392 (99.36%) |
M270 | 13,721,075 | 13,658,694 (100%) | 83,811 (0.61%) | 6 | 13,522,792 (99.01%) |