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Table 1 Samples and sequence data sets used in this study

From: Comparative analyses of copy number variations between Bos taurus and Bos indicus

Breeds Subspecies Location Animal count Coverage CNV count BioProject
Angus Bos taurus Europe 20 7–37× 34,774 PRJNA343262, PRJNA256210, PRJNA176557, PRJNA513064
Boran Bos indicus African 7 10–12× 27,996 PRJNA312138
Brahman Bos indicus Asian 4 17–19× 17,290 PRJNA432125
Gir Bos indicus Asian 3 7–15× 8787 PRJNA277147
Hereford Bos taurus Europe 12 8–17× 15,534 PRJNA343262, PRJNA176557
Kenana Bos indicus African 7 11× 29,291 PRJNA312138
Nelore Bos indicus Asian 6 6–10× 15,786 PRJNA507259, PRJNA277147
Ogaden Bos indicus African 7 10–12× 29,360 PRJNA312138
N’dama Bos taurus African 4 5–15× 1992 PRJNA604048
Muturu Bos taurus African 3 7–10× 2013 PRJNA604048
  1. Note: The data of N’dama and Muturu were newly generated. The data for other animals were downloaded from the NCBI database