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Table 1 De novo assemblies of transcriptomes using Trinity and Oases

From: Development of a relevant strategy using de novo transcriptome assembly method for transcriptome comparisons between Muscovy and common duck species and their reciprocal inter-specific mule and hinny hybrids fed ad libitum and overfed

Transcriptome

Pekin

Muscovy

Hinny

Mule

Pekin + Muscovy

Hinny + Mule

Hinny + Mule

Assembler

Trinity

Trinity

Trinity

Trinity

Trinity

Trinity

Oases

Transcripts

491,089

481,855

631,041

661,646

808,211

1,388,585

1,328,985

Average length

1033

1134

825

838

833

626

2532

N50

2330

2694

1441

1464

1406

858

5014

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BMC Genomics

ISSN: 1471-2164

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