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Fig. 3 | BMC Genomics

Fig. 3

From: Development and comparison of RNA-sequencing pipelines for more accurate SNP identification: practical example of functional SNP detection associated with feed efficiency in Nellore beef cattle

Fig. 3

Alternative allele frequency by percentage of shared variants between two approaches. a Approach i) a) and Approach iii); b) Approach i) b) and Approach iii); c) Approach i) and Approach iii); d) Approach ii) a) and Approach iii); e) Approach ii) b) and Approach iii); f) Approach ii) and Approach iii). Approach i) = Non-merged samples (liver and muscle tissue); Approach i) a) = Non-merged samples (liver); Approach i) b) = Non-merged samples (muscle); Approach ii) = Merged samples for low-RFI and merged samples for high-RFI for each tissue (liver and muscle tissue); Approach ii) a) = Merged samples for low-RFI and merged samples for high-RFI for each tissue (liver tissue); Approach ii) b) = Merged samples for low-RFI and merged samples for high-RFI for each tissue (muscle tissue); Approach iii) = Merged samples for low- and high-RFI for both tissues (liver and muscle tissue)

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BMC Genomics

ISSN: 1471-2164

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