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Table 2 Putative enzymes involved in PS biosynthsis of and their gene expression in F.filiformis

From: Genome-wide analysis and prediction of genes involved in the biosynthesis of polysaccharides and bioactive secondary metabolites in high-temperature-tolerant wild Flammulina filiformis

EC No. Gene ID gene length Enzyme name FPKM mean
E-value FB Liu355 PD Liu355 MK Liu355 FPKM DK Liu355 Cultivar 5.642
5.3.1.9 gene3100 2559 Glucose-6-phosphate isomerase 0 66.43 69.62 104.75 95.85 80.55
2.7.1.1 gene8329 1551 Hexokinase 1E-124 71.13 75.91 100.65 90.18 72.05
2.7.1.1 gene6893 1515 Hexokinase 7E-81 54.55 133.98 63.93 124.08 132.22
5.3.1.8 gene3253 1215 Mannose-6-phosphate isomerase 1E-99 50.54 30.08 48.00 49.57 64.08
4.2.1.47 gene2044 1131 GDP-D-mannose dehydratase   77.37 69.54 139.04 106.22 122.26
2.7.7.9 gene3603 2301 UDP-glucose pyrophosphorylase 0 237.51 235.28 371.96 198.44 229.93
2.7.7.9 gene3631 4578 UDP-glucose pyrophosphorylase 4E-135 10.34 3.80 29.95 6.22 8.14
5.1.3.2 gene6737 1158 UDP-glucose 4-epimerase 3E-63 63.69 77.37 53.52 47.21 74.03
1.1.1.22 gene10364 1458 UDP-glucose dehydrogenase 9E-84 106.55 121.62 199.55 108.85 150.53
4.1.1.35 gene6505 1350 UDP-glucuronic acid decarboxylase 0 182.47 118.70 186.57 117.16 252.40
2.7.1.6 gene2127 1581 Galactokinase 3E-89 29.62 26.75 27.22 37.11 45.66
2.7.7.12 gene3782 1128 Galactose-1-phosphate uridyltransferase 6E-103 5.64 22.78 7.52 8.43 11.61
1.1.1.9 gene9850 864 D-xylose reductase 1E-106 211.66 169.46 83.98 150.70 180.47
1.1.1.14 gene10388 1218 Zinc-dependent alcohol dehydrogenase 4E-46 109.79 89.73 115.09 88.14 127.83
4.1.2.13 gene7057 1074 Fructose-bisphosphate aldolase 2E-160 359.67 334.01 354.86 298.99 304.30
3.1.3.11 gene9805 2235 Fructose-1,6-bisphosphatase 4E-117 73.51 112.62 64.35 124.76 93.38
2.7.1.17 gene52 1653 D-xylulose kinase 9E-126 12.52 15.67 2.25 8.38 5.15
2.2.1.1 gene5296 2049 Transketolase 0 234.88 171.98 187.99 189.28 138.91
2.2.1.1 gene10236 2109 Transketolase 6E-180 9.77 13.12 2.46 18.96 24.79
2.2.1.1 gene9220 2172 Transketolase 3E-172 3.54 3.86 4.42 4.41 0.41
2.7.1.11 gene4194 3438 6-phosphofructokinase 0 68.27 59.02 87.68 71.13 74.46
  1. FPKM value is mean of three biological replicates.
  2. Abbreviations: MK monokaryotic mycelium, DK dikaryotic mycelium, FB fruiting body, PD primordium