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Table 2 Putative enzymes involved in PS biosynthsis of and their gene expression in F.filiformis

From: Genome-wide analysis and prediction of genes involved in the biosynthesis of polysaccharides and bioactive secondary metabolites in high-temperature-tolerant wild Flammulina filiformis

EC No.

Gene ID

gene length

Enzyme name

FPKM mean

E-value

FB Liu355

PD Liu355

MK Liu355 FPKM

DK Liu355

Cultivar 5.642

5.3.1.9

gene3100

2559

Glucose-6-phosphate isomerase

0

66.43

69.62

104.75

95.85

80.55

2.7.1.1

gene8329

1551

Hexokinase

1E-124

71.13

75.91

100.65

90.18

72.05

2.7.1.1

gene6893

1515

Hexokinase

7E-81

54.55

133.98

63.93

124.08

132.22

5.3.1.8

gene3253

1215

Mannose-6-phosphate isomerase

1E-99

50.54

30.08

48.00

49.57

64.08

4.2.1.47

gene2044

1131

GDP-D-mannose dehydratase

 

77.37

69.54

139.04

106.22

122.26

2.7.7.9

gene3603

2301

UDP-glucose pyrophosphorylase

0

237.51

235.28

371.96

198.44

229.93

2.7.7.9

gene3631

4578

UDP-glucose pyrophosphorylase

4E-135

10.34

3.80

29.95

6.22

8.14

5.1.3.2

gene6737

1158

UDP-glucose 4-epimerase

3E-63

63.69

77.37

53.52

47.21

74.03

1.1.1.22

gene10364

1458

UDP-glucose dehydrogenase

9E-84

106.55

121.62

199.55

108.85

150.53

4.1.1.35

gene6505

1350

UDP-glucuronic acid decarboxylase

0

182.47

118.70

186.57

117.16

252.40

2.7.1.6

gene2127

1581

Galactokinase

3E-89

29.62

26.75

27.22

37.11

45.66

2.7.7.12

gene3782

1128

Galactose-1-phosphate uridyltransferase

6E-103

5.64

22.78

7.52

8.43

11.61

1.1.1.9

gene9850

864

D-xylose reductase

1E-106

211.66

169.46

83.98

150.70

180.47

1.1.1.14

gene10388

1218

Zinc-dependent alcohol dehydrogenase

4E-46

109.79

89.73

115.09

88.14

127.83

4.1.2.13

gene7057

1074

Fructose-bisphosphate aldolase

2E-160

359.67

334.01

354.86

298.99

304.30

3.1.3.11

gene9805

2235

Fructose-1,6-bisphosphatase

4E-117

73.51

112.62

64.35

124.76

93.38

2.7.1.17

gene52

1653

D-xylulose kinase

9E-126

12.52

15.67

2.25

8.38

5.15

2.2.1.1

gene5296

2049

Transketolase

0

234.88

171.98

187.99

189.28

138.91

2.2.1.1

gene10236

2109

Transketolase

6E-180

9.77

13.12

2.46

18.96

24.79

2.2.1.1

gene9220

2172

Transketolase

3E-172

3.54

3.86

4.42

4.41

0.41

2.7.1.11

gene4194

3438

6-phosphofructokinase

0

68.27

59.02

87.68

71.13

74.46

  1. FPKM value is mean of three biological replicates.
  2. Abbreviations: MK monokaryotic mycelium, DK dikaryotic mycelium, FB fruiting body, PD primordium