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Table 4 Expression level of 12 genes encoding enzymes involved into sesquiterpenoid biosynthesis in F. filiformis

From: Genome-wide analysis and prediction of genes involved in the biosynthesis of polysaccharides and bioactive secondary metabolites in high-temperature-tolerant wild Flammulina filiformis

Gene ID chromosome length wild_FB_FPKM wild_primordia_FPKM wild_MK_FPKM wild_DK_FPKM clutivar_DK_FPKM log2ratio wild_DK/cultivar DK) log2ratio wild_DK/MK log2ratio wild FB/DK log2ratio wild_FB/PD log2 ratio wild PD/DK Description
gene2785 Scaffold121 909 0.24 0.15 0.1 0.25 0.16 0.39 0.97 -0.02 0.2 -0.21 Trichodiene synthase
gene 1358 Scaffold78 1005 4.52 32.1 2.15 5.16 1.57 1.47 0.82 -0.15 -3.21 3.06 Linoleate 10R-lipoxygenase
gene1358-D2 Scaffold262 1005 45.38 48.94 124.54 82.53 38.31 0.86 -1.03 -0.82 -0.50 -0.32 Alpha-muurolene synthase
gene3100 Scaffold10 2559 66.43 69.62 104.75 95.85 80.55 0.01 -0.56 -0.49 -0.49 0.00 Hypothetic protein
gene1663-D2 Scaffold157 1035 1.87 0.17 1.34 0.27 3.49 -3.90 -2.72 2.89 3.10 -0.20 Delta(6)-protoilludene synthase
gene9115 Scaffold2 1038 111.29 4.54 2.69 21.74 10.70 0.77 2.59 2.37 4.17 -1.80 Delta(6)-protoilludene synthase
gene1140 Scaffold110 891 5.16 4.34 2.22 5.34 4.36 0.07 0.84 -0.03 -0.21 0.18 Trichodiene synthase
gene4450 Scaffold150 936 101.68 38.30 6.24 29.57 22.48 0.15 1.81 1.76 0.92 0.83 -
gene2254 Scaffold201 996 0.82 0.26 0.09 0.21 171.85 -9.93 0.71 2.04 1.25 0.79 Trichodiene synthase
gene10498-D2 Scaffold62 864 0.14 0.06 0.14 0.02 0.01 0.71 -3.10 2.65 0.75 1.89 -
gene9115-D2 Scaffold49 1038 87.98 3.11 3.31 23.40 16.45 0.25 2.40 1.93 4.39 -2.46 Delta(6)-protoilludene synthase
gene6325-D2 Scaffold61 1017 43.08 3.28 0.89 42.16 11.23 1.66 5.14 0.06 3.27 -3.21 Delta(6)-protoilludene synthase
  1. FPKM value is the mean expression value of three biological replicates
  2. black bont means genes significantly upregulated
  3. Abbreviation: MK monokaryontic mycelium, DK Dikaryontic mycelium, FB fruiting body, PD primordium