Comparative analysis between high-pH and optimal pH DEGs. a Venn diagram comparing the DEGs in high-pH and optimal-pH datasets. b GO biological process term analysis result for the common DEGs in (a) as summarized by REVIGO. Bubble color indicates the log10 P value (bubbles of darker color are more significant) and the size indicates the frequency of the GO term in the underlying GO annotation database (bubbles of more general terms are larger). c Visualization of expression changes of the common DEGs in (a) in both the high-pH and optimal-pH datasets, where the x-axis represents different genes and the y-axis represents the logFC values. Only relevant genes are labeled; refer to Supplemental Table 2 for the complete gene list. Optimal-pH DEGs are from Rodríguez-Celma et al.