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Table 2 Number of Glyma models by gene category overexpressed in the standard UC7 and mutant UC413 (ii R t mi G) lines at three stages of seed maturation

From: Overexpression of an ethylene-forming ACC oxidase (ACO) gene precedes the Minute Hilum seed coat phenotype in Glycine max

  UC7 UC413 UC7 UC413 UC7 UC413
Gene categories EH10* EH25* EH50*
calcium binding 0 29 2 9 1 6
carbohydrate metab. 0 49 4 14 25 26
cell division/cycle 0 44 1 7 1 22
cell wall 4 90 3 29 37 33
disease resistance 2 86 3 32 17 67
DNA replication/repair 0 3 2 1 0 8
flavonoid pathway 0 14 5 6 5 8
growth/development 1 12 8 3 2 6
heavy metal 1 13 10 5 6 5
hormone related 3 33 0 16 13 14
lipid metabolism 5 84 0 35 19 27
membrane/transporter 10 139 0 38 27 61
oxidation/reduction 32 115 23 38 42 41
photosynthesis 33 8 21 4 14 5
protein metabolism 1 129 9 28 25 54
rDNA gene 86 0 84 0 85 0
ribosomal protein 17 4 13 2 13 4
seed storage 2 13 4 4 17 6
signaling/kinases 2 59 1 6 4 23
stress/senescence 0 50 17 6 22 21
transcription factor 4 131 11 52 14 83
transcription related 6 134 6 61 13 154
other 0 15 0 5 0 12
unknown 25 231 31 74 73 173
Total per line 234 1485 258 475 475 859
Total per stage 1719 733 1334
Total per line (−rDNA) 148 1485 174 475 390 859
Total per stage (−rDNA) 1633 649 1249
  1. * EH10, EH25 and EH50 represent the 10–25 mg, 25–50 mg and 50–100 mg fwt seed developmental stages, respectively