Table 1 Proportions of DECs of interest across the response to Vp infection - Number of DECs (robust Exact test at FDR < 0.05) detected at each time point for the holobiont transcriptome, the transcriptome of aiptasia alone, and genes belonging to the four GO classes of interest in this study: 'immune response', 'receptor activity', 'signal transduction', and 'peptidase activity'. The percentage of DECs belonging to the aiptasia-specific response is given in parentheses next to each DECs number
Number of DECs at: | 1 h post infection | 3 h post infection | 6 h post infection | 12 h post infection |
|---|---|---|---|---|
Holobiont-wide transcriptomic activity | ||||
 Up-regulated | 669 | 2198 | 2445 | 3754 |
 Down-regulated | 570 | 536 | 785 | 2025 |
Aiptasia-specific transcriptomic activity (% of holobiont’s activity) | ||||
 Up-regulated | 509 (76%) | 1697 (77%) | 1764 (72%) | 2614 (70%) |
 Down-regulated | 418 (73%) | 414 (77%) | 656 (83%) | 1584 (78%) |
DECs representing Ap’s immune response (% of Ap’s activity) | ||||
 Up-regulated | 12 (2%) | 34 (2%) | 34 (2%) | 41 (2%) |
 Down-regulated | 0 (< 1%) | 1 (< 1%) | 4 (< 1%) | 10 (< 1%) |
DECs representing Ap’s receptor activity | ||||
 Up-regulated | 42 (8%) | 40 (2%) | 49 (3%) | 66 (2.5%) |
 Down-regulated | 15 (4%) | 24 (6%) | 22 (3%) | 50 (3%) |
DECs representing Ap’s signal transduction | ||||
 Up-regulated | 31 (6%) | 71 (4%) | 94 (5%) | 128 (5%) |
 Down-regulated | 18 (4%) | 11 (3%) | 24 (4%) | 67 (4%) |
DECs representing Ap’s peptidase activity | ||||
 Up-regulated | 17 (3%) | 80 (5%) | 120 (7%) | 196 (7.5%) |
 Down-regulated | 10 (2%) | 12 (3%) | 15 (2%) | 43 (3%) |