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Table 1 Proportions of DECs of interest across the response to Vp infection - Number of DECs (robust Exact test at FDR < 0.05) detected at each time point for the holobiont transcriptome, the transcriptome of aiptasia alone, and genes belonging to the four GO classes of interest in this study: 'immune response', 'receptor activity', 'signal transduction', and 'peptidase activity'. The percentage of DECs belonging to the aiptasia-specific response is given in parentheses next to each DECs number

From: Gene expression kinetics of Exaiptasia pallida innate immune response to Vibrio parahaemolyticus infection

Number of DECs at: 1 h post infection 3 h post infection 6 h post infection 12 h post infection
Holobiont-wide transcriptomic activity
 Up-regulated 669 2198 2445 3754
 Down-regulated 570 536 785 2025
Aiptasia-specific transcriptomic activity (% of holobiont’s activity)
 Up-regulated 509 (76%) 1697 (77%) 1764 (72%) 2614 (70%)
 Down-regulated 418 (73%) 414 (77%) 656 (83%) 1584 (78%)
DECs representing Ap’s immune response (% of Ap’s activity)
 Up-regulated 12 (2%) 34 (2%) 34 (2%) 41 (2%)
 Down-regulated 0 (< 1%) 1 (< 1%) 4 (< 1%) 10 (< 1%)
DECs representing Ap’s receptor activity
 Up-regulated 42 (8%) 40 (2%) 49 (3%) 66 (2.5%)
 Down-regulated 15 (4%) 24 (6%) 22 (3%) 50 (3%)
DECs representing Ap’s signal transduction
 Up-regulated 31 (6%) 71 (4%) 94 (5%) 128 (5%)
 Down-regulated 18 (4%) 11 (3%) 24 (4%) 67 (4%)
DECs representing Ap’s peptidase activity
 Up-regulated 17 (3%) 80 (5%) 120 (7%) 196 (7.5%)
 Down-regulated 10 (2%) 12 (3%) 15 (2%) 43 (3%)