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Table 2 List of “hub” genes in the consensus network for tissue

From: Methylome and transcriptome profiles in three yak tissues revealed that DNA methylation and the transcription factor ZGPAT co-regulate milk production

Yak ID

Gene symbol

Module color

Tissue

Gene significance

p-value

Module membership

p-value

BmuPB014336

EEF1G

turquoise

lung

−0.73907039

2.64E-07

0.826748126

5.20E-10

BmuPB017352

PMS1

turquoise

lung

−0.71599797

9.13E-07

0.850552958

5.12E-11

BmuPB000878

MTPAP

turquoise

lung

−0.715583465

9.33E-07

0.912877613

8.73E-15

BmuPB018762

CXHXorf58

turquoise

lung

−0.709433358

1.27E-06

0.82262518

7.50E-10

BmuPB014450

RWDD4

turquoise

lung

−0.708526806

1.33E-06

0.923713618

9.94E-16

BmuPB011005

HUS1

turquoise

lung

−0.707137304

1.43E-06

0.875052199

2.97E-12

BmuPB005540

MTUS1

turquoise

lung

−0.704482832

1.62E-06

0.871626441

4.58E-12

BmuPB011453

EBF3

turquoise

lung

−0.703373458

1.71E-06

0.870717052

5.13E-12

BmuPB010608

LAMB3

turquoise

lung

0.70783756

1.38E-06

−0.85067459

5.05E-11

BmuPB004299

C3H3orf58

turquoise

lung

0.708872549

1.31E-06

−0.88522675

7.61E-13

BmuPB020871

G6PD

turquoise

lung

0.708930411

1.30E-06

−0.90727231

2.41E-14

BmuPB007438

ZCCHC6

turquoise

lung

0.709740967

1.25E-06

−0.84738754

7.13E-11

BmuPB007592

CTDSPL

turquoise

lung

0.711634321

1.14E-06

−0.8813581

1.30E-12

BmuPB004894

HIF1A

turquoise

lung

0.713237417

1.05E-06

−0.87302984

3.84E-12

BmuPB020508

FAM122B

turquoise

lung

0.720139618

7.37E-07

−0.82428698

6.48E-10

BmuPB018102

CCDC82

turquoise

lung

0.720592854

7.20E-07

−0.90665968

2.68E-14

BmuPB014539

CNTRL

turquoise

lung

0.722130497

6.64E-07

−0.87149974

4.65E-12

BmuPB003882

VAV3

turquoise

lung

0.725601285

5.53E-07

−0.89496378

1.82E-13

BmuPB020153

EPS8L1

turquoise

lung

0.727495147

4.99E-07

−0.82286844

7.34E-10

BmuPB010308

PGM2

turquoise

lung

0.746811608

1.69E-07

−0.83795918

1.83E-10

BmuPB004008

GDAP2

turquoise

lung

0.754806874

1.05E-07

−0.88661303

6.26E-13

BmuPB012568

WASF2

turquoise

lung

0.757428944

8.92E-08

−0.83874427

1.69E-10

BmuPB011966

ACTG1

turquoise

lung

0.772114072

3.49E-08

−0.84373776

1.03E-10

BmuPB014173

STAT6

turquoise

lung

0.80896084

2.37E-09

−0.84981355

5.53E-11

BmuPB015106

MAN2A1

turquoise

breast

0.705124693

1.57E-06

−0.84782348

6.81E-11

BmuPB008614

VPS26A

turquoise

breast

0.731553581

4.01E-07

−0.88669366

6.18E-13

BmuPB018496

FAM92A

turquoise

breast

0.718223061

8.14E-07

−0.85598454

2.85E-11

BmuPB005078

RASA1

turquoise

breast

0.705902582

1.51E-06

−0.85869193

2.11E-11

BmuPB011476

FAM53B

turquoise

breast

−0.728187435

4.81E-07

0.848680696

6.23E-11

BmuPB008348

EPDR1

turquoise

breast

−0.710771064

1.19E-06

0.832481139

3.08E-10

BmuPB003453

TROVE2

turquoise

breast

0.72654448

5.26E-07

−0.80669368

2.84E-09

BmuPB021200

VWA7

turquoise

breast

−0.722814498

6.41E-07

0.814033145

1.56E-09

BmuPB010528

RNF111

turquoise

breast

0.737234077

2.92E-07

−0.80146106

4.28E-09

BmuPB015811

FRMD3

turquoise

breast

−0.739223421

2.61E-07

0.809147869

2.33E-09