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Table 1 Number of protein homologs involved in the biosynthesis of miRNAs and their characteristic conserved domains. Asterisk (*) following species name abbreviations indicates that its genome is fully sequenced whereas no asterisk indicates that its genome is partially sequenced. (#) Indicates that the protein contains no conserved domains

From: A genome-wide screening for RNAi pathway proteins in Acari

Proteins

Domain description

Acari Super-order

Parasitiformes

Acariformes

Acari orders

Ixodida

Mesostigmata

Trombidiformes

Sarcoptiformes

Domain ID (IPR/Pfam)

Is*

Mo*

TM

Vd

Vj

Tu*

Dp

Em

Ss

Drosha

Ribonuclease domain

IPR000999/PF14622

1

1

1

6

3

1

1

1

1

One DsRNA binding domain

IPR014720/PF00035

Pasha

DsRNA binding domain

IPR014720/PF00035

2

1

1

3

3

2

2

1

1

Exportin1

Importin-beta_N

IPR001494/PF03810

1

1

1

2

2

3

1

1

1

Exportin-1/Importin-b-like

IPR013598/PF08389

Exportin-1, C-domain

IPR014877/PF08767

Exportin2

Importin-beta_N

IPR001494/PF03810

1

1

1

1

1

1

1

1

1

Exportin-2_C

IPR005043/PF03378

Exportin-2_Central

IPR013713/PF08506

Exportin5

Exportin-1/Importin-b-like

IPR013598/PF08389

1

1

0

1

1

2

1#

2#

1#

  1. Proteins shown are from Ixodes scapularis (Is), Metaseiulus occidentalis (Mo), Tropilaelaps mercedesae (Tm), Tetranychus urticae (Tu), Varroa destructor (Vd), Varroa jacobsoni (Vj), Dermatophagoides pteronyssinus (Dp) Euroglyphus maynei (Em) and Sarcoptes scabiei (Ss)