Transcriptome analysis identifies genes involved in the somatic embryogenesis of Eucalyptus

BMC Genomics

Table 1 Overview of transcriptome sequencing and gene expression profiles

Sample name	Total reads	Mapped reads	Percentage	Genes (TPM > 1)	Genes (TPM > 5)
A1_1	43,673,352	32,135,161	73.58%	18,777	13,561
A1_2	43,658,680	32,673,328	74.84%	19,024	13,855
A1_3	43,743,786	30,350,588	69.38%	19,115	13,858
A2_1	41,999,356	27,550,545	65.60%	18,950	13,435
A2_2	43,718,576	28,266,987	64.66%	19,094	13,360
A2_3	41,978,434	27,287,763	65.00%	18,406	12,650
B1_1	45,524,984	32,704,591	71.84%	20,240	14,464
B1_2	43,753,980	31,740,739	72.54%	20,186	14,274
B1_3	45,492,018	32,752,661	72.00%	19,942	14,147
B2_1	43,661,620	32,556,137	74.56%	19,322	13,518
B2_2	47,151,700	35,051,250	74.34%	19,338	13,567
B2_3	43,651,908	32,069,801	73.47%	19,276	13,536

ISSN: 1471-2164