Fig. 5

Differences between two lines with the same name using the Histogram view. a using a merged dataset of the SoySNP50K and 180 Axiom array from Lee et al. [21] we compared PI 424032 from the SoySNP50K to PI 424032 from Lee et al. SNPs in gray (left) represent the total number of SNPs used in the comparison while SNPs in orange (right) indicate differences between the two lines. b using the SoySNP50K dataset, two Dwight lines were compared. Dwight from Dr. Song’s lab and Dwight directly from the soybean germplasm collection. SNPs in gray (left) represent the total number of SNPs used in the comparison while SNPs in pink (right) indicate differences between the two lines. Centromeric regions are indicated by dark gray boxes on the chromosomes. A subset of chromosomes are displayed