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Table 2 Enrichment analysis of directly interacting genes using STRING

From: Initial response of ovarian tissue transcriptome to vitrification or microwave-assisted dehydration in the domestic cat model

PPI cluster

PPI enrichment

#genes in cluster

#enriched terms

DEG source

DEG regulation

Visualization

Mitochondrial respiration

1.0E-16

8

39

V vs F

up

Figure 3b

Signal, Complement and coagulation cascades

1.04E-4

3

2

V vs F

up&down

Figure 3b

Ras, Rap1, PI3K-Akt and MAPK signaling pathways +

1.0E-16

36

74

D10 vs F

up&down

Figure 5b

Calcium-binding EGF-like domain

5.95E-09

4

9

D10 vs F

down

Figure 5b

Ras, Rap1, PI3K-Akt and MAPK signaling pathways, Signal, Complement and coagulation cascades +

1.0E-16

48

74

V vs F, D10 vs F

up&down

Figure 6b

Transmembrane helix

1.8E-8

4

6

V vs F, D10 vs F

up&down

Figure 6b

Leucine-rich repeat

1.64E-09

5

2

V vs F, D10 vs F

up&down

Figure 6b

  1. PPI enrichment: FDR adjusted p-value of cluster functional enrichment
  2. F Fresh ovarian tissue after dissection, V Vitrified/thawed tissue, D10 Tissue dehydrated for 10 min and rehydrated