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Table 1 Missense, nonsense and silent changes with different variant calling methods

From: Deep sampling and pooled amplicon sequencing reveals hidden genic variation in heterogeneous rye accessions

 

GATK

SNVer

CRISP

Common variants

Missense

1183

336

868

164

Nonsense

14

7

9

2

Total

1770

602

1322

348

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BMC Genomics

ISSN: 1471-2164

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