Table 1 Comparison of the genomes of “Ca. Kuenenia stuttgartiensis” strain KUST, strain MBR1, and strain CSTR1
Strain | KUST [9] | MBR1 [15] | CSTR1 (this study) |
|---|---|---|---|
Status | High quality draft (5 supercontigs) | Complete genome | Complete genome |
Size | 4,218,325 | 4,406,132 | 4,334,932 |
Sequencing technology | Sanger sequencing | SMRT sequencing | SMRT sequencing |
GC % | 41.0 | 41.1 | 41.0 |
Prediction of coding sequence | dps/orpheus, AMIGene, glimmer/rbsfinder and genemarks/genemark. hmm | AMIGene in MaGe pipeline [20] | |
# Coding sequences (CDSs) | 4664 | 4043 | 4965 |
Coding density % | 85.9 | 81.2 | 85.7 |
Average gene length | 776 | 902 | 751 |
# rRNA operons (5S, 16S, 23S) | 1 | 1 | 1 |
# tRNAs | 44 | 45 | 45 |