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Table 2 GO enrichment analysis of DEUs

From: Comparative transcriptome analysis of scaled and scaleless skins in Gymnocypris eckloni provides insights into the molecular mechanism of scale degeneration

 

DEUs between SSS and NSS

DEUs between ASS and NSS

GO term

N 1

FDR

GO term

N 1

FDR

CC 2

myofibril

96

1.2E-80

extracellular region

36

1.0E-04

contractile fiber

96

7.1E-80

myofibril

11

7.2E-04

sarcomere

88

2.0E-76

contractile fiber

11

7.2E-04

contractile fiber part

89

2.2E-75

sarcomere

10

7.2E-04

Z disc

56

1.8E-44

contractile fiber part

10

9.6E-04

striated muscle thin filament

32

3.4E-37

interstitial matrix

3

5.7E-03

myofilament

32

1.0E-35

melanosome membrane

3

5.9E-03

actin cytoskeleton

74

1.1E-33

cardiac Troponin complex

2

5.9E-03

cardiac myofibril

11

4.2E-16

Z disc

7

6.5E-03

sarcoplasm

24

1.0E-16

cardiac myofibril

2

2.6E-02

MF 3

actin binding

75

1.2E-31

luteinizing hormone receptor activity

2

5.1E-03

actin filament binding

51

1.1E-27

melanocortin receptor activity

2

1.5E-02

cytoskeletal protein binding

93

2.3E-27

sulfur compound binding

7

3.2E-02

troponin C binding

13

5.2E-18

actin binding

12

3.3E-02

structural constituent of muscle

20

1.9E-16

frizzled binding

3

4.6E-02

alpha-actinin binding

18

5.4E-15

protein-hormone receptor activity

2

4.6E-02

muscle alpha-actinin binding

15

8.9E-15

cation:cation antiporter activity

3

4.6E-02

actinin binding

18

1.1E-13

solute:cation antiporter activity

3

4.9E-02

FATZ binding

9

3.0E-13

potassium:proton antiporter activity

2

4.9E-02

telethonin binding

11

1.2E-12

mono-olein transacylation activity

1

4.9E-02

BP 4

muscle structure development

87

3.3E-59

muscle structure development

12

6.0E-03

striated muscle cell development

64

2.9E-57

luteinizing hormone signaling pathway

2

6.0E-03

muscle cell development

65

5.2E-57

cellular response to luteinizing hormone stimulus

2

6.0E-03

muscle system process

66

4.8E-55

tissue development

22

7.2E-03

striated muscle cell differentiation

65

2.4E-52

response to luteinizing hormone

2

9.0E-03

muscle cell differentiation

69

1.0E-51

sodium ion import

3

9.3E-03

muscle organ development

65

2.3E-51

sodium ion import across plasma membrane

3

9.3E-03

myofibril assembly

49

1.4E-50

sodium ion import into cell

3

9.3E-03

muscle contraction

57

9.5E-48

appendage development

6

1.5E-02

muscle fiber development

39

4.3E-37

hair follicle morphogenesis

2

2.0E-02

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BMC Genomics

ISSN: 1471-2164

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