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Table 1 Homology analysis of TDF sequences on cDNA - AFLP

From: Transcriptomic and proteomic analyses of a new cytoplasmic male sterile line with a wild Gossypium bickii genetic background

Name

Length (bp)

Accession

Description

Max Identity

E Value

T1

272

Gar05G45090

UDP-glucuronosyl/UDP-glucosyltransferase

100

3.00E-60

T2

226

KAA3484033.1

60S ribosomal protein L13a-4-like

90.7

1.00E-20

T12

379

Gohir.D01G184400.1.p

UDP-glucuronosyl/UDP-glucosyltransferase

98.1

2.00E-41

T13

331

Gohir.D05G008900.1.p

PREDICTED: autophagy-related protein 11-like

100

4.00E-68

T14

282

KAA3484560.1

Retrovirus-related Pol polyprotein from transposon TNT 1–94

46.15

2.00E-09

T18

367

Gar05G25840

Ccc1 family

56.25

3.00E-22

T25

354

KAA3464041.1

ATP-dependent RNA helicase DHX36 isoform X2

100

3.00E-73

T26

381

Gohir.D11G100700.1.p

UDP-glucuronosyl/UDP-glucosyltransferase

99.19

1.00E-84

T27

381

Gohir.D11G100700.1.p

UDP-glucuronosyl/UDP-glucosyltransferase

99.19

3.00E-84

T39

155

Gohir.D05G202700.1.p

PREDICTED: probable disease resistance protein At4g33300

100

2.00E-27

T41

286

Gohir.A03G112300.1.p

U box domain

100

3.00E-46

T42

286

Gohir.A03G112300.1.p

U box domain

100

3.00E-46

T45

152

KAA3485461.1

vacuole membrane protein KMS1-like

96.43

2.00E-11

T51

348

Gar11G01680

NAC domain; NAC domain superfamily

98.26

5.00E-74

T52

348

Gar11G01680

NAC domain; NAC domain superfamily

99.13

2.00E-75

T53

297

Gohir.D12G262100.1.p

PREDICTED: calcium-dependent protein kinase 26-like

100

4.00E-44

T54

297

Gohir.D12G262100.1.p

PREDICTED: calcium-dependent protein kinase 26-like

98.99

4.00E-43

T55

348

Gar11G01680

NAC domain, NAC domain superfamily

96.52

2.00E-73

T58

331

Gar06G11140

Protein of unknown function DUF1764, eukaryotic

100

5.00E-49

T59

331

Gar06G11140

Protein of unknown function DUF1764, eukaryotic

100

2.00E-45

T60

330

Gar06G11140

Protein of unknown function DUF1764, eukaryotic

98.95

6.00E-36

T61

328

Gar06G11140

Protein of unknown function DUF1764, eukaryotic

98.95

1.00E-46

T62

331

Gar06G11140

Protein of unknown function DUF1764, eukaryotic

97.89

1.00E-48

T63

90

Gar05G22100

Interferon-related developmental regulator

100

3.00E-13

T67

256

Gar10G07450

Myb-like domain

100

5.00E-38

T69

146

Gar03G28270

uncharacterized protein LOC108476290

100

8.00E-06

T70

146

Gar03G28270

uncharacterized protein LOC108476290

100

8.00E-06

T73

170

Gar08G17900

protein BPS1, chloroplastic

92.06

7.00E-33

T74

170

Gar08G04770

Plant peroxidase

98.21

6.00E-34

T75

168

KAA3487221.1

Transposon Tf2–9 polyprotein

82.5

2.00E-17

T76

168

KAA3487221.1

Transposon Tf2–9 polyprotein

82.5

2.00E-17

T77

354

KAA3464041.1

ATP-dependent RNA helicase DHX36 isoform X2

98.26

3.00E-71

T78

354

KAA3464041.1

ATP-dependent RNA helicase DHX36 isoform X2

99.13

2.00E-72

T85

92

Gar09G06330

Reverse transcriptase domain

89.66

1.00E-11

T89

65

Gohir.D06G107150.1.p

Uncharacterised protein family Ycf15

95

2.00E-08

T90

473

Gar08G03730

F-box domain

97.92

1.00E-23

T92

227

Gar11G34830

Golgi apparatus membrane protein TVP23-like

98.31

5.00E-35

T93

70

KAA3480627.1

Gag protease polyprotein-like protein

91.3

4.00E−10

T94

84

KAA3461301.1

Retrovirus-related Pol polyprotein from transposon 17.6

80

1.00E-09

T95

347

Gar10G30060

NAD(P)-binding domain

100

4.00E-44

T96

347

Gohir.D10G225100.1.p

PREDICTED: UDP-glucuronic acid decarboxylase 6-like

100

2.00E-41

T97

347

Gohir.D10G225100.1.p

PREDICTED: UDP-glucuronic acid decarboxylase 6-like

100

2.00E-41