Table 1 Physicochemical properties of SsCIPK genes
From: New insights into the evolution and functional divergence of the CIPK gene family in Saccharum
Gene name | Genome ID | AA size | MW (kDa) | pI | Predicted locationa |
|---|---|---|---|---|---|
SsCIPK1 | Sspon.01G0001600-1A | 458 | 51.43 | 8.00 | chlo |
SsCIPK2a | Sspon.01G0008500-1A | 409 | 46.21 | 7.60 | chlo |
SsCIPK2b | Sspon.01G0008500-1P | 405 | 44.73 | 5.19 | chlo |
SsCIPK3 | Sspon.01G0009190-1A | 482 | 54.95 | 9.21 | chlo |
SsCIPK4a | Sspon.01G0023830-1A | 363 | 39.42 | 9.19 | cyto |
SsCIPK4b | Sspon.01G0023830-1P | 433 | 47.33 | 8.83 | cyto |
SsCIPK4c | Sspon.01G0023830-2P | 411 | 44.72 | 9.43 | E.R. |
SsCIPK4d | Sspon.01G0023830-3P | 433 | 47.12 | 9.09 | cyto |
SsCIPK4e | Sspon.01G0023830-4P | 432 | 58.24 | 8.89 | E.R. |
SsCIPK5 | Sspon.01G0034400-1B | 421 | 47.28 | 7.62 | chlo |
SsCIPK6 | Sspon.01G0009200-3D | 575 | 64.14 | 8.77 | plas |
SsCIPK7a | Sspon.02G0001070-1A | 432 | 46.49 | 7.68 | chlo |
SsCIPK7b | Sspon.02G0001070-1T | 434 | 46.64 | 7.71 | chlo |
SsCIPK8a | Sspon.02G0024240-1A | 562 | 63.13 | 9.45 | chlo |
SsCIPK8b | Sspon.02G0024240-1P | 449 | 50.67 | 9.22 | chlo |
SsCIPK9 | Sspon.02G0030610-1A | 356 | 38.72 | 9.44 | cyto |
SsCIPK10 | Sspon.02G0033090-1B | 438 | 49.85 | 9.16 | chlo |
SsCIPK11 | Sspon.02G0037890-1B | 469 | 51.29 | 8.95 | E.R. |
SsCIPK12 | Sspon.02G0042500-1B | 621 | 69.04 | 9.54 | chlo |
SsCIPK13 | Sspon.02G0044920-1B | 403 | 43.98 | 9.41 | E.R. |
SsCIPK14 | Sspon.02G0000740-2C | 448 | 50.60 | 7.13 | chlo |
SsCIPK15 | Sspon.03G0003630-1A | 581 | 65.21 | 6.94 | chlo |
SsCIPK16 | Sspon.03G0006080-1A | 512 | 56.30 | 9.02 | chlo |
SsCIPK17 | Sspon.03G0015890-1A | 463 | 51.96 | 6.38 | nucl |
SsCIPK18 | Sspon.03G0023620-1A | 517 | 57.18 | 8.36 | chlo |
SsCIPK19 | Sspon.03G0028160-1B | 440 | 48.73 | 8.56 | mito |
SsCIPK20 | Sspon.03G0013670-2B | 405 | 45.24 | 5.30 | cyto |
SsCIPK21 | Sspon.03G0023630-3C | 495 | 55.00 | 9.25 | chlo |
SsCIPK22a | Sspon.04G0017790-1A | 574 | 64.49 | 9.02 | chlo |
SsCIPK22b | Sspon.04G0017790-1P | 556 | 62.37 | 9.08 | chlo |
SsCIPK22c | Sspon.04G0017790-2P | 423 | 48.12 | 9.10 | chlo |
SsCIPK23a | Sspon.05G0020210-1A | 615 | 68.91 | 5.34 | plas |
SsCIPK23b | Sspon.05G0020210-1P | 434 | 49.77 | 8.54 | chlo |
SsCIPK23c | Sspon.05G0020210-2P | 400 | 45.84 | 8.11 | chlo |
SsCIPK24 | Sspon.05G0036030-1C | 440 | 50.40 | 7.15 | chlo |
SsCIPK25a | Sspon.06G0005650-1A | 451 | 48.86 | 9.09 | plas |
SsCIPK25b | Sspon.06G0005650-1P | 447 | 48.32 | 8.99 | plas |
SsCIPK26 | Sspon.07G0004410-1A | 567 | 64.05 | 8.67 | chlo |
SsCIPK27a | Sspon.07G0010390-1A | 440 | 48.24 | 8.35 | nucl |
SsCIPK27b | Sspon.07G0010390-1P | 414 | 44.63 | 9.88 | nucl |
SsCIPK28 | Sspon.07G0013900-1A | 437 | 49.32 | 6.55 | chlo |
SsCIPK29a | Sspon.07G0022730-1B | 478 | 53.70 | 8.66 | chlo |
SsCIPK29b | Sspon.07G0022730-1P | 505 | 56.71 | 7.71 | chlo |
SsCIPK30 | Sspon.07G0026860-1B | 459 | 51.64 | 6.48 | chlo |
SsCIPK31a | Sspon.05G0021220-2B | 482 | 54.75 | 9.22 | plas |
SsCIPK31b | Sspon.05G0021220-2P | 445 | 50.49 | 9.36 | chlo |
SsCIPK32 | Sspon.08G0006260-1A | 397 | 45.07 | 9.30 | cyto |
SsCIPK33 | Sspon.08G0020630-1B | 481 | 53.19 | 8.86 | nucl |