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Fig. 3 | BMC Genomics

Fig. 3

From: Whole genome sequencing identified a 16 kilobase deletion on ECA13 associated with distichiasis in Friesian horses

Fig. 3

Manhattan Plots from GWAS Analyses. Plots are organized by chromosome (denoted by different colors). The modified Bonferroni correction threshold is indicated by the black line (−log10(p) = 6.08). a –log10(p-values) from a chi-squared analysis for basic allelic association (λ = 1.5) (b) –log10(p-values) from a single locus mixed linear model (EMMAX) analysis under an additive model (λ = 1.0). b Two loci reach genome wide significance, on ECA5 and ECA13 after correcting for genomic inflation (pcorrected = 0.016 and 0.032, respectively)

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