|
Name
|
Original sample p-value
|
Replication sample p-value
|
Combined p-value
|
|---|
|
ECA13:g.340918C > T
|
2.26 × 10−8
|
1.61 × 10−5
|
5.71 × 10− 14
|
|
ECA13:g.343850A > C
|
2.26 × 10− 8
|
1.61 × 10− 5
|
5.71 × 10− 14
|
|
ECA13:g.330462G > A
|
2.73 × 10− 7
|
2.34 × 10− 5
|
8.58 × 10− 13
|
|
ECA13:g.425443C > T
|
4.16 × 10− 7
|
1.45 × 10− 4
|
1.64 × 10− 11
|
|
ECA13:g.230097C > T
|
2.27 × 10− 7
|
2.30 × 10− 4
|
2.31 × 10− 11
|
|
ECA13:g.134040A > G
|
8.15 × 10− 8
|
3.07 × 10− 4
|
2.31 × 10− 11
|
|
ECA13:g.142416C > T
|
2.27 × 10− 7
|
3.07 × 10− 4
|
2.73 × 10− 11
|
|
ECA13:g.153435C > T
|
2.27 × 10− 7
|
3.07 × 10− 4
|
2.73 × 10− 11
|
|
ECA13:g.195278 T > C
|
2.27 × 10− 7
|
3.07 × 10− 4
|
2.73 × 10− 11
|
|
ECA13:g.198581G > C
|
2.27 × 10− 7
|
3.07 × 10− 4
|
2.73 × 10− 11
|
|
ECA13:g.200759 T > C
|
2.27 × 10− 7
|
3.07 × 10− 4
|
2.73 × 10− 11
|
|
ECA13:g.201534G > A
|
2.27 × 10− 7
|
3.07 × 10− 4
|
2.73 × 10− 11
|
|
ECA13:g.206996G > A
|
2.27 × 10− 7
|
4.06 × 10− 4
|
3.75 × 10− 11
|
|
ECA13:g.121325G > A
|
2.73 × 10− 7
|
1.07 × 10− 3
|
1.12 × 10− 11
|
|
ECA13:g.122064G > A
|
2.73 × 10− 7
|
1.07 × 10− 3
|
1.12 × 10− 11
|
|
ECA13:g.122243C > T
|
2.73 × 10− 7
|
1.07 × 10− 3
|
1.12 × 10− 11
|
|
ECA13:g.316346C > T
|
2.73 × 10− 7
|
1.07 × 10− 3
|
1.12 × 10− 11
|
|
ECA13:g.13611A > G
|
7.73 × 10− 7
|
1.10 × 10− 3
|
3.94 × 10− 10
|
|
ECA13:g.42897A > G
|
2.73 × 10− 7
|
1.10 × 10− 3
|
1.45 × 10− 10
|
|
ECA13:g.32112G > T
|
8.48 × 10− 7
|
1.39 × 10− 3
|
1.36 × 10− 9
|
|
ECA13:g.384663 T > C
|
5.94 × 10− 6
|
2.00 × 10− 3
|
5.77 × 10− 9
|
|
ECA13:g.15928A > G
|
8.15 × 10− 8
|
0.0288
|
2.04 × 10− 9
|
|
ECA5:g.39962594G > A
|
4.57 × 10− 6
|
0.404
|
4.65 × 10− 9
|
|
ECA5:g.39863319A > Ga
|
4.57 × 10− 6
|
0.478
|
1.28 × 10− 5
|
|
ECA12:g.3271275C > A
|
9.10 × 10− 6
|
0.716
|
6.75 × 10− 4
|
|
ECA12:g.3270900 T > C
|
1.57 × 10− 5
|
1
|
4.65 × 10− 4
|
|
ECA13:g.186975G > Ab
|
1
|
1
|
1
|
|
ECA13:g.189306C > Tb
|
1
|
1
|
1
|
|
ECA13:g.190216 T > Cb
|
1
|
1
|
1
|
- a This SNP was assessed through a PCR-RFLP analysis
- bAs these SNPs fall within the 16 kb deletion, they only yielded results in one case (see Fig. 5)
