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Table 2 Protein domain and gene ontology (GO) term

From: Bioinformatic analysis and functional predictions of selected regeneration-associated transcripts expressed by zebrafish microglia

Gene IDa

Protein domains

Biological process

Molecular function

P1

Protein kinase and CARDb domain

Protein phosphorylation, Regulation of apoptotic process,

Protein kinase,

Oligodendrocyte development

ATP binding

P2

none

none

none

P3

Immunoglobulin-like

Cell adhesion,

none

Viral entry into host cell

 

P4

Ribonuclease E/G

none

none

P5

MGC-24c and Mucin15

none

none

P6

none

none

none

P7

none

none

none

P8

Immunoglobulin-like

none

none

P9

Urotensin II

Regulation of blood pressure,

Hormone

Regulation of blood vessel diameter

P10

Chemokine interleukin-8-like

Immune response

chemokine

P11

P-type trefoil, Galactose mutarotase,

Carbohydrate metabolic process

Hydrolyzing O-glycosyl compounds,

Glycoside hydrolase

 

Carbohydrate binding,

  

N-6 Adenine-specific DNA methylases

P12

Coiled coil

Neuromast regeneration

none

  1. The protein domains and gene ontology (GO) terms found to be associated with the 12 predicted zebrafish proteins of interest
  2. aGene ID: P1 to P12 correspond to the symbol used for each predicted protein subjected to bioinformatics analysis
  3. bCARD caspase activation and recruitment domain
  4. cMGC-24 Multi-glycosylated core protein 24