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Table 1 BRANE Cut network validation from literature. Direct link refers to genes identified as implied in the cellulase production while indirect refers to genes having a side effect on the cellulase production (CP)

From: Glucose-lactose mixture feeds in industry-like conditions: a gene regulatory network analysis on the hyperproducing Trichoderma reesei strain Rut-C30

Gene ID

Name

Up/Down

Link to CP

Species

Reference

122208

xyr1

up

direct

T. reesei

[19]

26163

clr2

up

direct

N. crassa

[33]

77513

ace3

up

direct

T. reesei

[22]

122523

pmh29

down

direct

T. reesei

[22]

123713

medA

down

indirect

P. decumbuns

[68]

76590

pro1

down

direct

P. oxalicum

[37]

4430

wetA

down

indirect

P. decumbuns

[68]

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BMC Genomics

ISSN: 1471-2164

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