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Table 1 Main sequencing statistics

From: Hepatic transcriptome and DNA methylation patterns following perinatal and chronic BPS exposure in male mice

Sample name

Total reads

Uniquely aligned

Mapping efficiency (%)

CpGs Detected

CpGs cov >10

Average Coverage

Conv. Rate Meth. Spike-In (%)

Conv. Rate Unm. Spike-In (%)

SD_sample1

56,841,446

39,552,587

69

2,452,747

1,830,137

38

1.90

99.69

SD_sample2

42,686,853

29,690,766

69

2,370,803

1,702,974

30

1.58

99.67

SD_sample3

50,590,321

35,102,481

69

2,409,838

1,777,440

34

1.67

99.76

SD BPS1.5_sample1

77,445,640

53,608,226

69

2,527,456

1,908,307

49

1.63

99.74

SD BPS1.5_sample2

70,027,685

47,984,369

68

2,259,789

1,769,524

48

1.79

99.66

SD BPS1.5_sample3

47,817,786

32,953,242

68

2,366,331

1,717,666

33

1.71

99.71

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BMC Genomics

ISSN: 1471-2164

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