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Fig. 4 | BMC Genomics

Fig. 4

From: Transcriptome analysis reveals modulation of the STAT family in PEDV-infected IPEC-J2 cells

Fig. 4

Prediction of potential transcription factors. a Enrichment of putative transcription factor binding motifs in the promoter regions of differentially expressed genes detected by MEME. The right panel shows the annotation of the enriched motifs as determined by MAST (ID, number, p value). b qRT-PCR validation of STAT expression levels and those of their known target genes. The left axis represents the gene expression levels determined by qRT-PCR, and the right axis represents the expression levels determined by RNA-seq in FPKM units. mRNA expression levels were normalized to the mRNA levels of the pig ACTB gene. Graphed data represent the mean ± SD, n = 6. * represents p < 0.05, ** represents p < 0.01, *** represents p < 0.001

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