Skip to main content
Fig. 2 | BMC Genomics

Fig. 2

From: The landscape of lncRNAs in Cydia pomonella provides insights into their signatures and potential roles in transcriptional regulation

Fig. 2

Sequence characteristics of lncRNA transcripts. a Box plot showing the transcript size distribution of C. pomonella lncRNA and mRNA transcripts. As shown in the figure, lncRNAs are significantly smaller in size than mRNAs. b Comparison of expression levels between mRNAs and three subclasses of lncRNAs in C. pomonella. The maximal RPKM values in all samples were used for comparison. As shown in the figure, the y axis was log10 scaled. The two-tailed Wilcoxon rank sum test was used for the determination of statistical significance. Relationship of TEs with PCGs and lncRNAs. c Stacked bar plot for the presentation of the number of PCGs and lncRNAs that overlapped with TEs. Statistical significance was determined using Fisher’s exact test. d Pie chart showing the distribution pattern of different classes of TEs overlapping with PCGs (top) and lncRNAs (bottom)

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us