Table 1 Marker dataset characteristics and differences in distributions (Mann-Whitney rank test)
Marker type | Number of markers | Trimmed sequence length: mean, range (nt) | Maximum score per marker, range | |||
|---|---|---|---|---|---|---|
total | mapped in reference genome | selected (% of total) | ||||
mapped (% of total) | mapped uniquely (% of mapped) | |||||
SNP | 33,135 | 28,615 (86.4%) | 24,691 (86.3%) | 13,499 (40.7%) | 60.79, 15–69 | 85.0–100 |
silicoDArT | 50,929 | 35,719 (70.1%) | 31,770 (88.9%) | 26,369 (51.8%) | 57.20, 15–69 | 83.3–100 |
|  |  |  |  |  | p < 0.001 | p = 0.036 |