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Table 4 Up-regulated genes with known functions in Vd-X, Vd-Z and Vd-H at early stages of interaction

From: Transcriptomic analysis of gene expression of Verticillium dahliae upon treatment of the cotton root exudates

CodeGene IDEnzyme nameFPKM value
CKVdX6VdX12VdZ6VdZ12VdH6VdH12VdW6VdW12
1VDAG_02051High-affinity glucose transporter ght229.480222.0466484.2395547.608660.9715493.52616103.05846.6229330.56167
2VDAG_03649Sugar transporter0.3387161.0265220.9728630.5712311.1157730.7290551.1287150.5095360.50572
3VDAG_09835Hexose transporter1.4652573.9688133.9368144.5698353.1083474.2462362.3976041.9890691.935044
4VDAG_09983Sugar transporter0.8263511.3308521.6207891.963330.8092081.5179351.8165331.1727471.108737
5VDAG_00832Inner membrane transport protein yfaV1.3281222.696943.9870474.9887562.5445486.301853.712842.1028352.608609
6VDAG_00833Thiol-specific monooxygenase2.8124373.3721496.2290756.8646584.6420156.1323062.8215183.312513.406964
7VDAG_02269Pantothenate transporter liz10.57473510.516443.5930050.6127678.5525475.7016580.1575460.2815390.041829
8VDAG_07864DUF895 domain membrane protein00.3581070.3657470.6450670.1053140.5056420.3423380.2133050.133121
9VDAG_01073NAD (P) H-dependent D-xylose reductase15.7574420.6696830.7515233.8178726.8047228.3704528.3336316.9142118.73819
10VDAG_01137Thiamine thiazole synthase614.59581120.375879.3086769.9721351.3331043.0971213.615780.4955914.2021
11VDAG_01672Conidial development protein fluffy12.0324522.9561816.6706914.2267123.6536422.7036824.986713.7573615.00116
12VDAG_02162Oviduct-specific glycoprotein0.2279840.6934030.4230620.6201650.3357180.6642250.7022860.3718980.391474
13VDAG_02175Beta-glucosidase00.2306860.2319270.3745790.2324060.4035970.0987180.0363080.102984
14VDAG_02633Beta-lactamase family protein3.0509376.1460875.6121436.3184165.7777957.1294296.2239593.3045374.690835
15VDAG_02843Fibronectin2.2552163.6417774.316234.3460892.9882674.0243844.2279083.2173973.142531
16VDAG_02844Ubiquitin carboxyl-terminal hydrolase1.9532364.6475563.4914742.8676154.2955823.8387863.7690972.8597832.493258
17VDAG_03942Beta-lactamase family protein3.714124111.174118.619328.60822365.6395558.84750.2677885.3856141.313926
18VDAG_03943Cyclopentanone 1,2-monooxygenase3.091277213.91327.6154413.96051120.082592.529510.8661788.167492.187358
19VDAG_04707Helicase SWR181.01633152.1582107.6387110.2411147.0122139.7217137.8717105.301132.1303
20VDAG_05314N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase9.77400525.6561414.1033915.612419.1198827.4759719.2706815.5887616.02938
21VDAG_05458Acetylxylan esterase0.5530472.8971872.1879762.7765392.5876271.9284490.9689310.8625810.885039
22VDAG_06953Kinesin light chain0.4255951.3363140.6417060.958341.1682271.6277481.0757560.380340.897279
23VDAG_08600Thiopurine S-methyltransferase family protein28.3832741.4209771.5750756.8039459.6643360.4357562.8180237.9875938.88032
24VDAG_08689Retinol dehydrogenase1.9328192.6081556.5981168.7902656.56724.2250193.0101943.1772773.647746
25VDAG_08954Carboxylic ester hydrolase0.9565653.3762285.3361644.8066723.0626546.825882.1739582.3904731.772136
27VDAG_08979URE2 protein4.0806276.680387.9589578.9148887.6248588.2202445.7101694.3105284.728051
26VDAG_09114Galactose oxidase0.0766310.2454380.5552760.5887350.2219880.7728770.1789270.1845110.193227
28VDAG_09269NAD (P) transhydrogenase1.4346565.4105152.937512.3648362.8302613.3778821.6395961.0750591.322266
29VDAG_09707Amidase0.3404970.5976861.1382960.6751140.8533341.0905830.6682880.3903840.487727
30VDAG_10195Vacuolar protein sorting-associated protein10.9067426.1685116.1775716.1611523.0735425.9823221.0342416.0395416.69196
31VDAG_10402Isoamyl alcohol oxidase1.2894723.4637873.2257753.4690813.143583.6915912.3739172.2609472.547368