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Table 2 Procedures and results of transcriptome filtering, annotation and differential expression

From: Changes in life history traits and transcriptional regulation of Coccinellini ladybirds in using alternative prey

Procedure

CS

HA

PJ

CM

Initial

66,779

85,740

50,143

73,655

Exclude FPKM< 1

8773

9048

9562

9061

Annotated in Pfam

6724

6841

7097

6432

Annotated in NR

7844

8079

8179

7944

Annotated in KOG

5434

6245

5660

6432

Annotated in GO

2987

3055

1707

3176

Up-regulated

294

102

99

534

Down-regulated

202

200

91

257

  1. FPKM Fragments per kilobase of transcript per million mapped reads, NR Non-redundant database, KOG Eukaryotic Orthologous Groups database, GO Gene Ontology database
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BMC Genomics

ISSN: 1471-2164

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