Table 2 Summary statistics for the transcriptome assembly. The evaluation of the assembly is shown both for the original assembly and after filtering with TransRate and TransDecoder
From: Gene regulatory response to hyposalinity in the brown seaweed Fucus vesiculosus
Transcriptome assembly | Original assembly | Filtered assembly |
|---|---|---|
Total # genes | 295,013 | 33,487 |
Total # of transcripts | 382,992 | 58,943 |
N50 transcript size, bp | 854 | 1206 |
Average transcript length, bp | 581.5 | 912 |
Total assembled bases | 222,713,028 | 53,753,658 |