Table 5 Classification of variants according their position in the predicted branch point (n = 120) (Motif 4-mer: TRAY)
SVM-BPfinder | BPP | Branchpointer | LaBranchoR | RNABPS | |
|---|---|---|---|---|---|
TP | 24 | 32 | 32 | 27 | 30 |
FP | 6 | 7 | 12 | 15 | 12 |
TN | 76 | 75 | 69 | 67 | 70 |
FN | 14 | 6 | 6 | 11 | 8 |
Accuracy | 83.33% | 89.17% | 84.87% | 78.33% | 83.33% |
Sensitivity | 63.16% | 84.21% | 84.21% | 71.05% | 78.95% |
Specificity | 92.68% | 91.46% | 85.19% | 81.71% | 85.37% |