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Table 2 Statistic analysis of clean reads for small RNA sequencing in tuber initiation and expansion stages in yam

From: Integrated mRNA and miRNA transcriptome analysis reveals a regulatory network for tuber expansion in Chinese yam (Dioscorea opposita)

Sample name

Tota reads

Clean reads

Mapped reads

Known miRNA

Novel miRNA

Total miRNA

GH16_I_r1

27,687,839

25,438,600

6,388,211

18

50

68

GH16_I_r2

28,663,585

26,268,556

5,872,589

19

47

66

GH16_I_r3

28,610,515

26,482,287

6,086,348

21

49

70

GH16_E_r1

28,256,295

26,276,062

4,593,044

20

49

69

GH16_E_r2

29,343,139

27,085,820

5,032,588

20

49

69

GH16_E_r3

28,395,798

26,406,723

4,642,869

22

50

72

Sum

170,957,171

157,958,048

    
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BMC Genomics

ISSN: 1471-2164

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