Table 1 Go enrichment results for different types of CNVR
From: Functional and population genetic features of copy number variations in two dairy cattle populations
Type of CNVRs | GO Term | Size | Count | Expected count | Enrichment value | P-value (FDR corrected) |
|---|---|---|---|---|---|---|
DEL | Chemical synaptic transmission | 278 | 22 | 8.3 | 2.65 | 0.126 |
DEL | Anterograde trans-synaptic signalling | 278 | 22 | 8.3 | 2.65 | 0.063 |
DEL | Trans-synaptic signalling | 279 | 22 | 8.33 | 2.64 | 0.044 |
DEL | Synaptic signalling | 279 | 22 | 8.33 | 2.64 | 0.033 |
DUP | Positive regulation of adaptive immune response | 32 | 6 | 0.44 | 13.76 | 0.019 |
DUP | Positive regulation of immune response | 57 | 7 | 0.78 | 9.01 | 0.021 |
DUP | Positive regulation of response to stimulus | 75 | 7 | 1.02 | 6.85 | 0.053 |
DUP | Adaptive immune response | 108 | 9 | 1.47 | 6.11 | 0.018 |
DUP | Immune effector process | 104 | 8 | 1.42 | 5.64 | 0.049 |
COMP | Response to stimulus | 1718 | 45 | 16.63 | 2.71 | 0.000 |
COMP | Immune response | 298 | 14 | 2.88 | 4.85 | 0.002 |
COMP | Detection of stimulus involved in sensory perception | 477 | 16 | 4.62 | 3.47 | 0.011 |
COMP | B cell activation | 17 | 4 | 0.16 | 24.31 | 0.013 |
COMP | Detection of chemical stimulus involved in sensory perception | 477 | 16 | 4.62 | 3.47 | 0.014 |
COMP | Detection of stimulus | 501 | 16 | 4.85 | 3.3 | 0.015 |
COMP | Immune system process | 322 | 12 | 3.12 | 3.85 | 0.025 |
COMP | B cell receptor signalling pathway | 23 | 4 | 0.22 | 17.97 | 0.027 |