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Table 2 KEGG pathways linked to gonad specific genes preferentially expressed in germ cells

From: Transcriptomic analysis of dead end knockout testis reveals germ cell and gonadal somatic factors in Atlantic salmon

Pathway ID

Pathway

Number of genes

310

Lysine degradation

14

4610

Complement and coagulation cascades

13

4540

Gap junction

5

4145

Phagosome

4

4110

Cell cycle

4

230

Purine metabolism

3

240

Pyrimidine metabolism

3

4068

FoxO signaling pathway

3

4022

cGMP-PKG signaling pathway

3

4151

PI3K-Akt signaling pathway

3

4514

Cell adhesion molecules (CAMs)

3

4914

Progesterone-mediated oocyte maturation

3

3020

RNA polymerase

2

4141

Protein processing in endoplasmic reticulum

2

4010

MAPK signaling pathway

2

4152

AMPK signaling pathway

2

4080

Neuroactive ligand-receptor interaction

2

4210

Apoptosis

2

4115

p53 signaling pathway

2

4520

Adherens junction

2

4550

Signaling pathways regulating pluripotency of stem cells

2

4621

NOD-like receptor signaling pathway

2

4910

Insulin signaling pathway

2

4915

Estrogen signaling pathway

2

4918

Thyroid hormone synthesis

2

4919

Thyroid hormone signaling pathway

2

4211

Longevity regulating pathway

2

1522

Endocrine resistance

2

  1. Pathway ID, pathway and number of genes within each pathway are shown. Pathways associated with only one gene are not shown. The full list of KEGG pathways can be viewed in [Additional File 3]