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Table 3 Compacta results for the Arabidopsis assembly. d - Parameter value, z - Number of clusters (representative contigs), nAs - Number of Arabidopsis sequences identified

From: Compacta: a fast contig clustering tool for de novo assembled transcriptomes

d

 

z

nAS

0.000

 

13,770

3344

0.035

(dl)

28,704

18,381

0.500

 

34,860

20,455

0.955

(dr)

40,656

21,254

1.000

 

103,262

23,607