Comparative chloroplast genomics of the genus Taxodium

BMC Genomics

Table 1 Sequencing and assembly results of three chloroplast genomes of Taxodium

Species	Raw data (Mb)	Clean data (Mb)	Clean data GC(%)	Clean data Q20(%)	Clean data Q30(%)	GC Content(%)	N rate (%)
T. ascendens	5329	4895	37.85	98.02	93.94	35.22%	0%
T. distichum	5045	4695	35.74	98.11	94.2	35.26%	0%
T. mucronatum	6946	6595	34.19	98.38	94.91	35.25%	0%

Note: Read length: read length of valid data; Clean data GC: average GC content of valid data; Clean data Q20: Q20 value of valid data; Clean data Q30: Q30 value of valid data. Total Length (bp): The total length of the sample assembly result; GC Content (%): GC content of the sample assembly sequence; N rate (%): the content of unknown base N in the sample assembly sequence

ISSN: 1471-2164