Table 3 Positions of putative glycosylation (PGL) loci in T. forsythia strain FDC 92A2
From: Comparative genome characterization of the periodontal pathogen Tannerella forsythia
Locus tag (RefSeq, GenBank) | Position | Strand | Protein ID, Description | Conserved Domains | dbCAN |
|---|---|---|---|---|---|
PGL_1 | |||||
 BFO_RS00485, BFO_0104 | 119,936–121,180 | + | WP_014223582.1, glycosyltransferase group 1 family protein | cl28208 RfaB superfamily | GT4 |
 BFO_RS00535, BFO_0114 | 132,395–133,165 | + | WP_014223590.1, hypothetical protein | cl11394 Glyco_tranf_GTA_type superfamily | – |
 BFO_RS00545, BFO_0116 | 133,715–134,380 | + | WP_041590509.1, hypothetical protein | cl11394 Glyco_tranf_GTA_type superfamily | – |
 BFO_RS00550, BFO_0117 | 134,417–135,097 | + | WP_014223593.1, glycosyl transferase | cl01298 Glyco_transf_25 superfamily | GT25 |
PGL_2 | |||||
 BFO_RS02100, BFO_0467 | 500,734–501,384 | – | WP_052299218.1, hypothetical protein | cl02988 Glyco_transf_10 superfamily | GT10 |
 BFO_RS02105, BFO_0468 | 502,333–504,648 | – | WP_014223924.1 penicillin-binding protein 1C | TIGR02073 PBP_1c | GT51 |
 BFO_RS02135, BFO_0475 | 513,630–514,787 | + | WP_014223931.1 mannosyltransferase | cd03809 GT1_mtfB_like | GT4 |
PGL_3 | |||||
 BFO_RS02420, BFO_0544 | 586,421–587,608 | + | WP_014223997.1, glycosyl transferase family 1 | cl10013 Glycosyltransferase_GTB_type | GT4 |
 BFO_RS02430, BFO_0547 | 588,656–589,774 | + | WP_014223999.1, glycosyl transferase family 1 | cl10013 Glycosyltransferase_GTB_type | GT4 |
 BFO_RS02435, BFO_0564 | 589,763–590,959 | – | WP_014224000.1, hypothetical protein | cl10013 Glycosyltransferase_GTB_type | – |
PGL_4 | |||||
 BFO_RS07405, BFO_1699 | 1,808,692–1,809,366 | – | WP_014225043.1, glycosyl transferase | cl01298 Glyco_transf_25 superfamily | – |
 BFO_RS07410, BFO_1700 | 1,809,356–1,810,438 | – | WP_014225044.1, glycosyl transferase | cl10013 Glycosyltransferase_GTB_type | GT4 |
 BFO_RS14425, BFO_1705 | 1,812,769–1,814,883 | – | WP_052299248.1, hypothetical protein | cd03801 GT1_YqgM_like | GT4 |
PGL_5 | |||||
 BFO_RS08625, BFO_1977 | 2,106,020–2,107,996 | – | WP_014225302.1, hypothetical protein | cl28208 RfaB superfamily | – |
 BFO_RS08630, BFO_1978 | 2,108,002–2,108,745 | – | WP_014225303.1, glycosyl transferase family 2 | cd04179 DPM_DPG-synthase_like | GT2 |
 BFO_RS14090, BFO_1987 | 2,122,302–2,123,087 | + | WP_052299260.1, hypothetical protein | cd04186 GT_2_like_c | GT2 |
 BFO_RS08670, BFO_ | 2,123,084–2,124,346 | + | WP_041590821.1, hypothetical protein | cl10013 Glycosyltransferase_GTB_type | GT4 |
 BFO_RS08675, BFO_1990 | 2,124,694–2,126,031 | + | WP_014225312.1, glycosyltransferase group 1 family protein | cl10013 Glycosyltransferase_GTB_type | GT4 |
 BFO_RS08680, BFO_1989 | 2,126,026–2,127,159 | – | WP_014225313.1, glycosyl transferase | cl10013 Glycosyltransferase_GTB_type | GT4 |
PGL_6 | |||||
 BFO_RS10550, BFO_2565 | 2,598,381–2,599,619 | – | WP_014225708.1, hypothetical protein | cl10013 Glycosyltransferase_GTB_type | GT4 |
 BFO_RS10555, BFO_2566 | 2,599,616–2,600,713 | – | WP_014225709.1, UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) | cd03786 GT1_UDP-GlcNAc_2-Epimerase | – |
 BFO_RS10600, BFO_2575 | 2,607,474–2,608,256 | + | WP_014225718.1 glycosyl transferase | cd04179 DPM_DPG-synthase_like | GT2 |