Genome-wide identification of MAPKKK genes and their responses to phytoplasma infection in Chinese jujube (Ziziphus jujuba Mill.)

Liu, Zhiguo; Wang, Lixin; Xue, Chaoling; Chu, Yuetong; Gao, Weilin; Zhao, Yitong; Zhao, Jin; Liu, Mengjun

doi:10.1186/s12864-020-6548-6

Table 1 Characteristic of MAPK Kinase Kinases from Ziziphus jujuba Mill. (ZjMAPKKKs)

From: Genome-wide identification of MAPKKK genes and their responses to phytoplasma infection in Chinese jujube (Ziziphus jujuba Mill.)

Group	Name	Locus ID	Chr	Location	CDS (bp)	Amino acid length (AA)	PI	MW (KD)
	ZjMAPKKK1	LOC107412947	Chr1	512,097–518,184	3351	1116	5.56	123.87
	ZjMAPKKK2	LOC101223021	Chr1	588,730..592155	1062	353	7.16	39.83
	ZjMAPKKK3	LOC107413171	Chr1	6,034,745..6041047	1380	459	8.99	52.10
	ZjMAPKKK4	LOC107414729	Chr1	7,211,380..7216386	1119	372	9.01	42.35
	ZjMAPKKK5	LOC107422643	Chr1	17,322,629..17330021	1707	568	6.55	64.31
	ZjMAPKKK7	LOC107427772	Chr1	28,684,428..28693993	4455	1484	5.27	160.66
	ZjMAPKKK8	LOC107429777	Chr1	31,236,415..31242279	3432	1143	7.67	126.67
	ZjMAPKKK11	LOC107412267	Chr2	23,790,620..23798118	2913	970	5.83	107.05
	ZjMAPKKK13	LOC107415263	Chr4	1,873,602..1877368	1059	352	7.66	39.46
Raf	ZjMAPKKK14	LOC107417160	Chr4	23,620,629..23633413	2208	735	6.1	83.02
	ZjMAPKKK15	LOC107417666	Chr5	2,301,847..2306994	1248	415	8.14	46.31
	ZjMAPKKK16	LOC107417677	Chr5	2,314,642..2318435	1257	418	7.62	46.80
	ZjMAPKKK17	LOC107417907	Chr5	5,814,146..5820584	3789	1262	5.18	139.68
	ZjMAPKKK18	LOC107417903	Chr5	5,822,068..5828809	3825	1274	5.43	140.42
	ZjMAPKKK19	LOC107418405	Chr5	10,268,020..10272429	1074	357	8.97	40.45
	ZjMAPKKK20	LOC107418996	Chr5	18,139,031..18145136	2343	780	6.38	87.04
	ZjMAPKKK22	LOC107421353	Chr6	17,987,031..17997512	2832	943	8.15	105.39
	ZjMAPKKK23	LOC107420099	Chr6	2,889,952..2898479	2856	951	5.53	104.94
	ZjMAPKKK24	LOC107422567	Chr7	14,102,760..14109942	3444	1147	5.87	127.99
	ZjMAPKKK26	LOC107423093	Chr7	21,216,345..21219607	1173	390	7.92	43.53
	ZjMAPKKK27	LOC107423594	Chr7	27,636,786..27641226	1251	416	6.11	46.81
	ZjMAPKKK28	LOC107424157	Chr8	4,344,698..4348053	2049	682	8.81	79.10
	ZjMAPKKK30	LOC107424832	Chr8	9,154,812..9160628	1179	392	9.11	44.23
	ZjMAPKKK32	LOC107426395	Chr9	4,943,575..4946720	1203	400	6.29	44.66
	ZjMAPKKK33	LOC107426719	Chr9	5,733,599..5742140	3945	1314	5.32	144.52
	ZjMAPKKK34	LOC107427400	Chr9	18,534,579..18538786	1032	343	5.84	38.71
	ZjMAPKKK38	LOC107428906	Chr10	10,418,263..10423580	1299	432	8.15	48.84
Raf	ZjMAPKKK39	LOC107428931	Chr10	11,520,310..11525561	1299	432	7.74	48.89
	ZjMAPKKK41	LOC107430036	Chr11	2,650,983..2657196	2181	726	6.97	81.01
	ZjMAPKKK42	LOC107431473	Chr11	19,821,853..19829329	1707	568	5.51	64.02
	ZjMAPKKK43	LOC107432147	Chr12	5,159,272..5168476	2556	851	5.98	93.67
	ZjMAPKKK45	LOC107408109	Unplaced Scaffold	688..6689	1425	474	9.12	53.23
	ZjMAPKKK46	LOC107405634	Unplaced Scaffold	5820..12905	1341	446	5.58	50.42
	ZjMAPKKK47	LOC107407393	Unplaced Scaffold	6471..11148	1125	374	7.13	42.29
	ZjMAPKKK48	LOC107406964	Unplaced Scaffold	13,195..15977	1005	334	7.68	37.91
	ZjMAPKKK49	LOC107404883	Unplaced Scaffold	14,404..17983	1251	416	6.24	46.77
	ZjMAPKKK50	LOC107406505	Unplaced Scaffold	16,102..20361	1059	352	7.17	39.84
	ZjMAPKKK51	LOC107405705	Unplaced Scaffold	33,936..39585	1158	385	7.51	42.93
	ZjMAPKKK52	LOC107403422	Unplaced Scaffold	48,143..64604	1647	548	5.13	61.65
	ZjMAPKKK53	LOC107435406	Unplaced Scaffold	61,008..63977	1479	492	9.34	56.56
	ZjMAPKKK55	LOC107435407	Unplaced Scaffold	134,848..138183	1482	493	9.22	56.35
MEKK	ZjMAPKKK6	LOC107423632	Chr1	18,688,160..18695042	2700	899	9.29	96.87
	ZjMAPKKK9	LOC107432528	Chr1	34,451,996..34453515	1428	475	4.78	53.09
	ZjMAPKKK10	LOC107411974	Chr2	21,809,712..21815908	2046	681	5.64	74.86
	ZjMAPKKK12	LOC107414154	Chr3	19,912,625..19913971	1266	421	4.95	46.85
	ZjMAPKKK21	LOC107420999	Chr6	10,913,503..10919747	1839	612	5.53	67.87
	ZjMAPKKK25	LOC107423026	Chr7	20,770,505..20775489	2058	685	6.78	75.80
	ZjMAPKKK29	LOC107424505	Chr8	6,765,530..6767083	1071	356	4.93	39.97
	ZjMAPKKK31	LOC107425633	Chr8	20,944,047..20949800	1563	520	9.11	56.65
	ZjMAPKKK35	LOC107427543	Chr9	20,198,543..20199481	939	312	6.52	35.52
	ZjMAPKKK36	LOC107428154	Chr10	1,469,136..1470695	762	253	7.01	28.29
	ZjMAPKKK37	LOC107428813	Chr10	8,441,149..8442948	825	274	4.89	30.43
	ZjMAPKKK40	LOC107429056	Chr10	13,522,021..13523553	1035	344	5.36	37.67
	ZjMAPKKK44	LOC107409320	Unplaced Scaffold	335..2009	1335	444	4.8	50.18
	ZjMAPKKK54	LOC107434197	Unplaced Scaffold	108,777..110183	1119	372	5.46	41.39
	ZjMAPKKK56	LOC107435014	Unplaced Scaffold	155,489..160603	1836	611	5.64	67.84

Note: Chr: chromosome; PI: the theoretical isoelectric point of proteins; MW: The theoretical molecular weight of proteins

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ISSN: 1471-2164

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