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Table 4 List of genes involved in insulin signalling pathway of Pde6c mutant zebrafish (p-value = 5.64e-03; FDR = 9.83e-02)

From: RNA-Seq reveals differential expression profiles and functional annotation of genes involved in retinal degeneration in Pde6c mutant Danio rerio

Ref mRNA

Gene Symbol

Gene Name

logFC

p-value

NM_001004527

ppp1cb

protein phosphatase 1, catalytic subunit, beta isozyme

−13.3391067

5.63E-09

NM_131855

prkci

protein kinase C, iota

−11.4865862

4.49E-05

NM_213075

flot2a

flotillin 2a

−11.94140373

7.05E-06

NM_001142672

insra

insulin receptor a

−4.775105577

2.21E-05

NM_001123229

insrb

insulin receptor b

−11.53691235

3.33E-05

NM_131381

gsk3b

glycogen synthase kinase 3 beta

−11.65098191

1.87E-05

NM_199570

calm3b

calmodulin 3b (phosphorylase kinase, delta)

−14.42999547

1.49E-11

NM_001077211

mtor

mechanistic target of rapamycin (serine/threonine kinase)

−12.74710586

1.23E-07

NM_212710

ppp1cab

protein phosphatase 1, catalytic subunit, alpha isozyme b

−4.868811067

1.31E-05

NM_199996

calm2a

calmodulin2a (p hosphorylase kinase, delta)

−13.04988312

3.41E-08

NM_194402

mknk2b

MAP kinase interacting serine/threonine kinase 2b

−14.02356489

1.26E-10

NM_214751

pck1

phosphoenolpyruvate carboxykinase 1 (soluble)

5.129531889

7.55E-09

NM_200315

irs2a

insulin receptor substrate 2a

−12.51373347

4.75E-07

NM_201023

prkacba

protein kinase, cAMP-dependent, catalytic, beta a

4.638063399

9.62E-09

NM_205744

braf

B-Raf proto-oncogene, serine/threonine kinase

−11.88966935

5.38E-06

NM_213035

grb2b

growth factor receptor-bound protein 2b

−12.43630299

7.66E-07

NM_213076

rps6kb1b

ribosomal protein S6 kinase b, polypeptide 1b

−11.31030831

6.05E-05

NM_213161

prkag1

protein kinase, AMP-activated, gamma 1 non-catalytic subunit

−11.20468266

0.000101616

NM_213252

hk1

hexokinase 1

−13.41102831

3.67E-09

NM_001017732

prkar1ab

protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b

−11.53493265

3.59E-05

NM_001077370

prkar2aa

protein kinase, cAMP-dependent, regulatory, type II, alpha A

−4.330637539

1.19E-05

NM_001281844

pik3r1

phosphoinositide-3-kinase, regulatory subunit 1 (alpha)

−13.92572365

2.37E-10

NM_131721

mapk8b

mitogen-activated protein kinase 8b

−5.355743879

1.18E-06

NM_001080066

g6pc3

glucose 6 phosphatase, catalytic, 3

4.465924297

9.85E-08