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Table 1 Significantly upregulated high abundant and low abundant milk proteins in Kashmiri and Jersey cattle

From: Comparative milk proteome analysis of Kashmiri and Jersey cattle identifies differential expression of key proteins involved in immune system regulation and milk quality

 Accession No.ProteinGene IDFCP-valueFDR
Kashmiri CattleSignificantly upregulated abundant milk proteins
J9UHS4Beta-caseinCSN22.740.0440.055
Q8HY42CD4 antigenCD42.090.0390.043
E6YCQ7LactoferrinLF2.040.0370.047
Significantly upregulated less abundant milk proteins
Q8HYK4Flavin-containing monooxygenase 3FMO316.60.0410.050
P80195Glycosylation-dependent cell adhesion molecule 1GLYCAM17.930.0370.047
P30932CD9 antigenCD97.240.0380.048
Q9TUI9ApelinAPLN3.630.0460.050
Q9TTC5ProbetacellulinBTC2.970.0370.042
Q9TRC0Enterotoxin-binding glycoprotein PP16KN/A2.910.0380.048
Q3SZR3Alpha-1-acid glycoproteinORM12.660.0460.050
C4PU73Serin peptidase inhibitor, clade ALOC2868712.530.0390.046
Q9TS52Adipocyte differentiation-related proteinN/A2.530.0420.055
P46201Uterine milk proteinN/A2.410.0430.049
Q5GN72Alpha-1-acid glycoproteinAGP2.070.0370.040
Jersey cattleSignificantly upregulated abundant milk proteins
P02754Beta-lactoglobulinLGB7.240.0370.051
A0A140T8A9Kappa-caseinCSN34.170.040.046
F6I8C5Zinc finger protein 496ZNF4962.330.0370.061
G9G9X6Alpha-lactalbuminLALBA2.110.0380.041
Significantly upregulated less abundant milk proteins
G8FZ88ATP synthase subunit AN/A4.090.0370.047
P62998Ras-related C3 botulinum toxin substrateRAC13.850.0440.067
P01888Beta-2-microglobulinB2M2.850.0390.041
Q3T0T7GTP-binding protein SAR1bSAR1B2.20.0370.046
Q9XSC9Transcobalamin-2TCN22.180.0440.051
Q95114LactadherinMFGE82.110.0390.049