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Table 2 Gene ontology terms enriched for significantly upregulated proteins in Kashmiri and Jersey cattle

From: Comparative milk proteome analysis of Kashmiri and Jersey cattle identifies differential expression of key proteins involved in immune system regulation and milk quality

FunctionsDescriptionGO termNo. of proteinsProtein IDsGene IDsP-valueFDR
Kashmiri Cattle
 MolecularCatalytic activityGO:000382418P19120, P12763, P30122, P11017, Q8MK44, P80209, P62871, Q8HXQ5, Q4GZT4, Q0IIG8, A5PK46, P00794, P80929, Q0VCZ8, Q2UVX4, P80025HSPA8, AHSG, CEL, GNB2, DGAT1, CTSD, GNB1, ABCC1, ABCG2, RAB18, PNLIPRP2, CYM, ANG2, ACSL1, C3, LPO0.00020.44
Antioxidant activityGO:00162091P80025LPO0.08430.79
 CellularMembraneGO:00160204P19120, P30122, Q8MK44, P80209, Q8HXQ5, Q4GZT4, Q0IIG8, P00794, P02702, P30932, P18892HSPA8, CEL, DGAT1, CTSD, ABCC1, ABCG2, RAB18,CYM,FOLR1,CD9,BTN1A10.01980.181
Extracellular regionGO:000557610P46201, P02666, P30122, C4PU73, Q9TTE1, P21214, P80025Uterine milk protein, CSN2, CEL, Serin peptidase inhibitor,SERPINA3–1,TGFB2,LPO0.001110.0354
Jersey Cattle
 MolecularReproductionGO:00000032A0A140T8A9, P11151, P02668, A5PK46CSN3, LPL, CSN3,0.0050.422
Catalytic activityGO:000382422Q8HYJ9, Q5E9R3, P11151, Q5E9B1, Q8MK44,
P62998, Q2TBH2, Q8HXQ5, Q148J4, F1MN60,
P101, Q4GZT4, A5PK46, P00794, P80457, P02754,
P80025
FMO3, EHD1, LPL, LDHB, DGAT1, RAC1, RRAS, ABCC1, RAB2A, ATP2B2, ANG1, ABCG2, PNLIPRP2, CYM, XDH, LGB, LPO0.0660.83
Antioxidant activityGO:00162091P80025LPO0.0870.52
 CellularExtracellular regionGO:000557611P17697, A0A140T8A9, P34955, P46201, P02663,
Q3ZCH5, P41361, P28800, C4PU73,
P02662,P02668,P21214,P80025
CLU, CSN3, SERPINA1, Uterine milk protein, CSN1S2, AZGP1, SERPINC1, SERPINF2, Serin peptidase inhibitor, CSN1S1, CSN3, TGFB2, LPO00