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Table 3 Frequency and distribution of mutations associated with drug resistance M. tuberculosis

From: Whole genome sequencing of Mycobacterium tuberculosis isolates and clinical outcomes of patients treated for multidrug-resistant tuberculosis in Tanzania

Drug

Target gene

mutation

n (%) in monoresistance

n (%) in MDR-TB strains

n (%) in other resistance pattern

Total (N)

RIF (n = 27)

rpoB

S450L

4 (14.8)

16 (59.3)

6 (22.2)

26

D435Y

1 (3.7)

1 (3.7)

–

1

INH (n = 55)

katG

S315T

10 (18.2)

24 (43.6)

16 (29.1)

50

S302R

–

1 (1.8)

1 (1.8)

2

N138S

–

1 (1.8)

–

1

oxyR’-ahpC

C52T

–

1 (1.8)

–

1

C54T

–

1 (1.8)

–

1

EMB (n = 29)

embB

Y319C

–

–

1 (3.4)

1

Q497R

–

6 (20.9)

2 (6.9)

8

G406D

–

–

1 (3.4)

1

G406S

–

2 (6.9)

3 (10.3)

5

M306L

–

1 (3.4)

–

1

M306I

–

1 (3.4)

–

1

G406A

–

3 (10.3)

–

3

M306V

–

2 (6.9)

–

2

Y334H

–

1 (3.4)

–

1

M306T

–

1 (3.4)

–

1

EmbC-embA

C16T

1

1 (3.4)

3 (10.3)

5

PZA (n = 19)

pncA

V128G

–

8 (42.1)

–

8

A193AT

–

–

1 (5.3)

1

G17D

–

–

1 (5.3)

1

D8N

1

–

–

1

L85P

–

–

1 (5.3)

1

A46V

–

1 (5.3)

–

1

P69L

–

1 (5.3)

–

1

Q10R

–

1 (5.3)

–

1

D49G

–

1 (5.3)

–

1

D63A

–

1 (5.3)

–

1

Rv2044c

–

1 (5.3)

1 (5.3)

2

STR (n = 3)

rpsL

K43R

–

2 (100)

–

2

rrs

C517T

–

1 (100)

–

1

FLO (n = 1)

gyrB

R446C

–

1 (100)

–

1

AMK (n = 2)

rrs

C517T

–

2 (100)

–

2