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Fig. 6 | BMC Genomics

Fig. 6

From: Biased visibility in Hi-C datasets marks dynamically regulated condensed and decondensed chromatin states genome-wide

Fig. 6

Capturing chromatin decondensation in Lamin KO cells. a Boxplots representing change in Hi-C read counts in the LAD domains after Lamin knock out in mESC cells. P-value was calculated using two-tailed Mann-Whitney U test. b-c Examples representing change in Hi-C read counts and contact matrices in WT and Lamin KO cells. The bottom panel of matrices represent the Lamin KO to WT fold-change in interaction frequencies

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