Table 7 Result of 10-fold cross-validation on the different tools
From: InvBFM: finding genomic inversions from high-throughput sequence data based on feature mining
Tool | TP | TN | FP | FN | Precision | Recall | F1-score |
|---|---|---|---|---|---|---|---|
Delly | 85.30 | 124.10 | 186.70 | 0.90 | 31.36% | 98.96% | 47.63% |
Lumpy | 52.70 | 289.60 | 1.20 | 53.50 | 97.77% | 49.62% | 65.83% |
LumpyEP | 48.50 | 289.80 | 1.00 | 57.70 | 97.98% | 45.67% | 62.30% |
Pindel | 50.30 | 146.70 | 164.10 | 35.90 | 23.46% | 58.35% | 33.47% |
InvBFM | 59.72 | 288.47 | 22.33 | 26.47 | 72.78% | 69.29% | 70.99% |