Table 2 Correlation of sample age and several library quality metrics when reads were aligned to the targeted regions from the Helicoverpa armigera reference genome
Library quality metric | Correlation with sample age |
|---|---|
Total number of reads | T269 = 4.38; P < 0.011.726e−05; R = 0.26 (0.14:0.37) |
Mean coverage | T269 = 4.47; P < 0.01; R = 0.26 (0.15:0.37) |
Total number of baits on target | T269 = 3.94; P < 0.01; R = 0.23 (0.12:0.34) |
Total number of baits at 1x coverage | T269 = 8.77; P < 0.01; R = 0.47 (0.37:0.56) |
Total number of baits at 5x coverage | T269 = 7.47; P < 0.01; R = 0.41 (0.31:0.51) |
Total number of baits at 10x coverage | T269 = 6.95; P = < 0.01; R = 0.39 (0.28:0.49) |
Total number of baits at 20x coverage | T269 = 6.31; P < 0.01; R = 0.36 (0.25:0.46) |
Total number of baits at 30x coverage | T269 = 5.84; P = < 0.01 R = 0.34 (0.23:0.44) |
Saturation | T269 = -0.22; P < 0.01; R = 0.22(−0.33:-0.10) |
Enrichment | T269 = 6.65; P = < 0.01; R = 0.38 (0.27:0.47) |