Fig. 1

Phylogenies of Brettanomyces and Saccharomyces species. Rooted, maximum likelihood trees were calculated for Brettanomyces species with Ogataea polymorpha as an outgroup (a) and Saccharomyces species with Naumovozyma castellii as an outgroup (b). The phylogenies were calculated from concatenated codon alignments of single copy orthologs. IQ-TREE’s ultrafast Bootstrap values are calculated from 1000 replications and are shown at branch nodes in red. Branch support calculated from individual gene trees is shown at branch nodes in blue. The two phylogenies are transformed to the same scale (substitutions per site)