Skip to main content
Fig. 8 | BMC Genomics

Fig. 8

From: A completeness-independent method for pre-selection of closely related genomes for species delineation in prokaryotes

Fig. 8

Sieving performance on metagenome-assembled genomes (MAGs). a for sensitivity. Black, 91,794 intraspecies pairs sieved by both FRAGTE and TETRA; gray, 2822 intraspecies pairs uniquely detected by FRAGTE. b for specificity. c for total number of sievied pairs. d for runtime. The runtime is the summed executive time including both fragmenting and determining phrases for all pairs by using serial execution (single thread, single process). Only a single compute node with two Intel® Xeon® Silver 4114 20-core processors was used. All were run on 3032 MAGs (Additional file 2: Table S5) against themselves, which comprise 94,618 intra- and 9,095,374 inter-species pairs

Back to article page
\