Table 6 Average runtime (seconds) of FastTree-RAxML-GTM (GTM(RAxML)) and RAxML on 1000-species exon datasets
From: Unblended disjoint tree merging using GTM improves species tree estimation
| Â | GTM(RAxML) | RAxML |
|---|---|---|
Low ILS 10 Genes (n=19) | Â | Â |
-FastTree | 279.6 | n.a. |
-RAxML subtrees | 831.3 | n.a. |
-GTM | 0.4 | n.a. |
-Total | 1,111.3 | 7,313.7 |
Low ILS 25 Genes (n=10) | Â | Â |
-FastTree | 686.3 | n.a. |
-RAxML subtrees | 1,460.6 | n.a. |
-GTM | 0.4 | n.a. |
-Total | 2,147.3 | 10,539.4 |
High ILS 10 Genes (n=12) | Â | Â |
-FastTree | 283.7 | n.a. |
-RAxML subtrees | 637.5 | n.a. |
-GTM | 0.4 | n.a. |
-Total | 921.6 | 10,135.6 |
High ILS 25 Genes (n=20) | Â | Â |
-FastTree | 731.5 | n.a. |
-RAxML subtrees | 1363.1 | n.a. |
-GTM | 0.4 | n.a. |
-Total | 2,095 | n.a. |