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Table 3 Performance of the PangTreeBuild algorithm

From: Getting insight into the pan-genome structure with PangTree

DatasetNumber of genomesTotal sequence lengthMSA file sizeComputation timeMemory peak
Ebola pan-genome Simulated1603Mbp4.9MB2m44s280MB
- without rearrangements13813.8Mbp24MB20m25s1.18GB
- with rearrangements13813.8Mbp27MB24m46s1.38GB